Detailed information of matrix profile MA1205.1

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Profile summary
Name: AGL6
Matrix ID: MA1205.1
Class: MADS box factors
Family: MIKC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12743119
Uniprot ID: P29386  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 178 153 61 37 34 103 0 1 193 56 60 13 85 98 87 1 207 401 386 ]
C [ 26 46 113 9 3 13 482 353 34 23 0 2 42 39 0 5 67 8 5 ]
G [ 41 27 61 4 4 71 0 0 49 18 0 0 8 92 394 465 8 1 8 ]
T [ 237 256 247 432 441 295 0 128 206 385 422 467 347 253 1 11 200 72 83 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1205.1 MA1205 1 AGL6 Arabidopsis thaliana
MIKC MADS box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: