Detailed information of matrix profile MA1343.1

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Profile summary
Name: BZIP52
Matrix ID: MA1343.1
Class: Basic leucine zipper factors (bZIP)
Family: Group I
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q8VWG0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 207 51 0 309 0 599 1 3 0 61 116 98 187 247 ]
C [ 68 68 0 290 599 0 0 479 198 78 0 118 204 102 ]
G [ 109 46 548 0 0 0 598 85 4 242 332 139 65 76 ]
T [ 215 434 51 0 0 0 0 32 397 218 151 244 143 174 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1343.1 MA1343 1 BZIP52 Arabidopsis thaliana
Group I Basic leucine zipper factors (bZIP)
MA1343.2 MA1343 2 BZIP52 Arabidopsis thaliana
Group I Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0309.1

ChIP-seq Centrality
-log(P-value): 14894.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0309.1

ChIP-seq Centrality
-log(P-value): 14927.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: