Detailed information of matrix profile MA1345.1

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Profile summary
Name: BZIP48
Matrix ID: MA1345.1
Class: Basic leucine zipper factors (bZIP)
Family: Group S
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 9680995
Uniprot ID: Q8RU59  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 7 84 0 453 1 4 0 36 433 5 53 279 130 122 ]
C [ 4 369 452 0 449 1 1 417 0 24 384 34 77 145 ]
G [ 328 0 0 0 0 448 0 0 16 319 3 33 72 46 ]
T [ 114 0 1 0 3 0 452 0 4 105 13 107 174 140 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1345.1 MA1345 1 BZIP48 Arabidopsis thaliana
Group S Basic leucine zipper factors (bZIP)
MA1345.2 MA1345 2 BZIP48 Arabidopsis thaliana
Group S Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0307.1

ChIP-seq Centrality
-log(P-value): 1793.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0307.1

ChIP-seq Centrality
-log(P-value): 1797.78

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: