Detailed information of matrix profile MA1362.1

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Profile summary
Name: bHLH77
Matrix ID: MA1362.1
Class: Basic helix-loop-helix factors (bHLH)
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q9LK48  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 21 28 16 31 21 13 0 0 74 0 0 0 0 28 10 ]
C [ 12 13 2 4 13 7 23 75 0 69 0 0 0 36 10 ]
G [ 35 12 32 10 22 40 22 0 1 0 75 0 75 0 28 ]
T [ 7 22 25 30 19 15 30 0 0 6 0 75 0 11 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1362.1 MA1362 1 bHLH77 Arabidopsis thaliana
Basic helix-loop-helix factors (bHLH)
MA1362.2 MA1362 2 bHLH77 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: