Detailed information of matrix profile MA1363.1

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Profile summary
Name: LRL2
Matrix ID: MA1363.1
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21335373
Uniprot ID: Q8S3D5  
Source: 27203113
Comment: No family information available.

Sequence logo

Frequency matrix

         
A [ 1 6 3 5 6 0 9 0 4 0 34 0 1 0 0 ]
C [ 27 1 2 1 9 5 7 10 8 34 0 34 0 0 1 ]
G [ 5 23 5 25 8 13 2 13 18 0 0 0 33 0 33 ]
T [ 1 4 24 3 11 16 16 11 4 0 0 0 0 34 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1363.1 MA1363 1 LRL2 Arabidopsis thaliana
bHLH Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: