Detailed information of matrix profile MA1375.1

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Profile summary
Name: ANL2
Matrix ID: MA1375.1
Class: Homeo domain factors
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q0WV12  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 170 23 548 405 0 123 597 597 0 46 140 ]
C [ 35 228 42 0 0 2 0 0 0 1 334 ]
G [ 284 8 0 1 0 0 1 1 0 513 3 ]
T [ 109 339 8 192 598 473 0 0 598 38 121 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1375.1 MA1375 1 ANL2 Arabidopsis thaliana
HD-ZIP Homeo domain factors
MA1375.2 MA1375 2 ANL2 Arabidopsis thaliana
HD-ZIP Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0225.1

ChIP-seq Centrality
-log(P-value): 12622.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0225.1

ChIP-seq Centrality
-log(P-value): 12572.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: