Detailed information of matrix profile MA1385.1

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Profile summary
Name: AT2G40260
Matrix ID: MA1385.1
Class: Tryptophan cluster factors
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 305 421 285 397 0 599 600 1 266 137 174 170 211 263 305 ]
C [ 78 20 29 9 0 0 0 0 35 2 8 114 67 54 27 ]
G [ 87 83 152 194 600 0 0 0 151 0 35 66 72 121 129 ]
T [ 130 76 134 0 0 1 0 599 148 461 383 250 250 162 139 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1385.1 MA1385 1 AT2G40260 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
MA1385.2 MA1385 2 AT2G40260 Arabidopsis thaliana
GARP_G2-like Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0254.1

ChIP-seq Centrality
-log(P-value): 6180.34

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0254.1

ChIP-seq Centrality
-log(P-value): 6159.67

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: