Detailed information of matrix profile MA1419.1

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Profile summary
Name: IRF4
Matrix ID: MA1419.1
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25896227
Uniprot ID: Q15306  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 9846 27742 80 13 1002 5 3 3801 497 8 444 112 31 5937 13901 ]
C [ 5644 253 4251 4 23 7 45331 4 593 4 25 91 45331 87 2105 ]
G [ 4640 17589 45331 15 11 46 6 45331 45331 6 8 124 66 45331 18876 ]
T [ 25202 1377 829 45331 45331 45331 57 27 187 45331 45331 45331 350 364 10448 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1419.1 MA1419 1 IRF4 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
MA1419.2 MA1419 2 IRF4 Homo sapiens
Interferon-regulatory factors Tryptophan cluster factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0182.1

ChIP-seq Centrality
-log(P-value): 1097.28

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0182.1

ChIP-seq Centrality
-log(P-value): 1125.17

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: