Detailed information of matrix profile MA1471.1

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Profile summary
Name: BARX2
Matrix ID: MA1471.1
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 10051657
Uniprot ID: Q9UMQ3  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 8675 16962 18517 28388 28388 2814 15759 28388 7 19 28388 6425 ]
C [ 6473 3613 69 30 3348 16934 28388 49 0 2051 325 9281 ]
G [ 6745 3632 47 99 2920 1342 5135 10009 41 0 415 7422 ]
T [ 6494 11426 9871 7507 2847 11453 3452 0 28388 28388 4259 5260 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1471.1 MA1471 1 BARX2 Homo sapiens
NK Homeo domain factors
MA1471.2 MA1471 2 BARX2 Homo sapiens
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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