Detailed information of matrix profile MA1672.1

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Profile summary
Name: GBF2
Matrix ID: MA1672.1
Class: Basic leucine zipper factors (bZIP)
Family: Group G
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: PBM
Validation: 25215497
Uniprot ID: P42775  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 2246 2324 560 7479 223 319 227 174 333 1027 5558 2457 2559 ]
C [ 1574 2084 2988 101 7122 107 127 83 153 6254 596 1420 1516 ]
G [ 2262 679 3420 145 221 7275 77 7553 6028 282 891 1653 1488 ]
T [ 1840 2835 954 197 356 221 7491 112 1408 359 877 2392 2359 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1672.1 MA1672 1 GBF2 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
MA1672.2 MA1672 2 GBF2 Arabidopsis thaliana
Group G Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0668.1

ChIP-seq Centrality
-log(P-value): 5655.27

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0668.1

ChIP-seq Centrality
-log(P-value): 5689.45

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: