Detailed information of matrix profile PB0005.1

Profile summary

Name: Bbx_1
Matrix ID: PB0005.1
Class: Other Alpha-Helix
Family: High Mobility Group box (HMG)
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: Q8VBW5  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

A [ 24 61 46 13 9 14 92 45 4 5 87 78 12 29 33 ]
C [ 19 16 14 3 2 75 3 8 2 6 2 5 28 13 6 ]
G [ 12 6 22 5 2 6 2 12 3 75 2 3 35 12 35 ]
T [ 44 18 18 78 87 5 4 34 92 14 9 13 24 46 26 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.