Detailed information of matrix profile PB0048.1

Profile summary

Name: Nkx3-1_1
Matrix ID: PB0048.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 19443739
Uniprot ID: P97436  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

A [ 32 27 31 51 32 6 0 96 3 0 0 93 75 21 24 49 18 ]
C [ 36 15 13 15 18 82 87 0 96 0 5 1 5 34 24 17 25 ]
G [ 13 14 21 23 28 11 0 0 0 0 0 1 10 35 28 21 25 ]
T [ 19 44 35 11 23 1 13 4 0 99 95 6 11 10 24 12 32 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.