Detailed information of matrix profile PH0005.1

Profile summary

Name: Barhl1
Matrix ID: PH0005.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: P63157  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

A [ 47 61 28 75 72 8 1 95 89 0 1 98 55 12 27 22 ]
C [ 21 12 42 7 2 61 76 1 1 0 1 0 3 19 18 42 ]
G [ 14 14 13 14 22 18 0 3 0 0 0 0 33 33 23 14 ]
T [ 18 13 17 5 3 13 23 1 10 99 99 2 9 36 32 22 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.