Detailed information of matrix profile PH0007.1

Profile summary

Name: Barx1
Matrix ID: PH0007.1
Class: Helix-Turn-Helix
Family: Homeo
Collection: PBM_HOMEO
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 18585359
Uniprot ID: Q9ER42  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: Data is from Uniprobe database

Sequence logo

Frequency matrix

A [ 50 49 53 18 1 93 98 0 0 53 6 3 25 38 56 31 ]
C [ 26 24 6 30 46 5 1 0 2 0 39 39 21 23 8 14 ]
G [ 9 12 39 44 0 2 0 1 5 46 40 6 30 16 15 8 ]
T [ 14 16 3 8 53 0 0 98 93 1 15 53 25 23 21 46 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.