Detailed information of matrix profile PL0004.1

Profile summary

Name: hlh-27
Matrix ID: PL0004.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: Q18056  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: homodimer

Sequence logo

Frequency matrix

A [ 43 13 33 1 23 0 16 0 0 0 0 0 7 39 26 ]
C [ 14 17 9 94 5 91 0 0 0 0 94 86 61 19 17 ]
G [ 25 30 51 1 65 0 83 0 98 5 0 1 12 14 28 ]
T [ 16 38 4 1 5 7 0 98 0 93 4 10 19 26 27 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links