Detailed information of matrix profile PL0005.1

Profile summary

Name: hlh-30
Matrix ID: PL0005.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: P91527  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: homodimer

Sequence logo

Frequency matrix

A [ 38 21 36 61 5 0 94 0 13 2 1 83 0 36 38 28 21 ]
C [ 18 24 11 4 6 96 1 85 0 1 0 4 63 21 19 10 25 ]
G [ 16 30 20 23 4 0 1 0 85 1 96 6 0 14 18 22 24 ]
T [ 26 22 31 10 83 1 2 13 0 94 0 5 34 26 23 39 29 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links