Detailed information of matrix profile PL0005.1

Profile summary

Name: hlh-30
Matrix ID: PL0005.1
Class: Zipper-type
Family: Helix-Loop-Helix
Collection: PBM_HLH
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: PBM
Validation: 19632181
Uniprot ID: P91527  
Pazar TF:
TFBSshape ID:
TFencyclopedia IDs:
Source:
Comment: homodimer

Sequence logo

Frequency matrix

A [ 29 39 23 26 34 5 0 94 0 13 2 1 83 10 31 22 26 ]
C [ 24 22 18 14 0 6 96 1 85 0 1 0 4 23 20 30 16 ]
G [ 25 10 19 21 63 4 0 1 0 85 1 96 6 4 11 24 18 ]
T [ 21 28 38 36 0 83 1 2 13 0 94 0 5 61 36 21 38 ]

Binding sites information

No Binding sites available for this model.

TFBS profiles

No TFBSshape profile for this model.

External links