JASPAR CORE

Total 4279 profiles

Display profiles
ID Name Species Class Family Sequence logo
MA0011.2 br Drosophila melanogaster C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0012.1 br Drosophila melanogaster C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0012.2 br Drosophila melanogaster C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0013.1 br Drosophila melanogaster C2H2 zinc finger factors Other factors with up to three adjacent zinc fingers
MA0014.1 Pax5 Mus musculus Paired box factors Paired domain only
MA0014.2 PAX5 Homo sapiens Paired box factors Paired domain only
MA0014.3 PAX5 Homo sapiens Paired box factors Paired domain only
MA0014.4 PAX5 Homo sapiens Paired box factors Paired domain only
MA0015.1 Cf2 Drosophila melanogaster C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
MA0015.2 Cf2 Drosophila melanogaster C2H2 zinc finger factors Factors with multiple dispersed zinc fingers
Showing 10 profiles of page 4 from 428 pages

Analyze selected profiles

Please select matrix profiles on the left side to add to your cart or perform the following analysis.


You have 0 profile(s) in your cart. You can add profiles to the cart to download or perform analysis.

Input a (FASTA-formatted) sequence to scan with selected matrix models.

(3000 nucleotides left)

Relative profile score threshold %

Cluster selected models using STAMP tool.




You can use the Newick tree from results to visualize on PhyloTree

Create random matrix models based on selected models.


Create models with permuted columns from selected models.


Download the PFMs of the model(s) selected in four different formats.