Detailed information of matrix profile MA0037.3

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Profile summary
Name: GATA3
Matrix ID: MA0037.3
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: SMiLE-seq
Validation: 8321207
Uniprot ID: P23771  
Source: 28092692
Comment:

Sequence logo

Frequency matrix

         
A [ 68 109 47 83 999 0 0 271 ]
C [ 321 476 76 0 0 0 999 1 ]
G [ 188 301 15 2 0 0 0 226 ]
T [ 423 114 862 914 0 999 0 502 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0037.1 MA0037 1 GATA3 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
MA0037.2 MA0037 2 GATA3 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
MA0037.3 MA0037 3 GATA3 Homo sapiens
C4-GATA-related Other C4 zinc finger-type factors
MA0037.4 MA0037 4 Gata3 Mus musculus
C4-GATA-related Other C4 zinc finger-type factors
MA0037.5 MA0037 5 Gata3 Mus musculus
C4-GATA-related Other C4 zinc finger-type factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0042.2

ChIP-seq Centrality
-log(P-value): 4580.25

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0042.2

ChIP-seq Centrality
-log(P-value): 5035.73

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: