Detailed information of matrix profile MA0039.4

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Profile summary
Name: KLF4
Matrix ID: MA0039.4
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 28473536
Uniprot ID: O43474  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 12219 15012 2565 1218 1129 3456 976 1969 4633 2560 11819 11484 ]
C [ 14422 6292 1005 1870 1470 6598 793 1422 1214 1583 18473 14243 ]
G [ 19217 18249 51045 51112 52366 161 52875 45405 47865 49209 14038 17520 ]
T [ 9959 16264 1202 1617 852 45602 1173 7021 2105 2465 11487 12570 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0039.1 MA0039 1 Klf4 Mus musculus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.2 MA0039 2 Klf4 Mus musculus
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.3 MA0039 3 KLF4 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.4 MA0039 4 KLF4 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
MA0039.5 MA0039 5 KLF4 Homo sapiens
Three-zinc finger Kruppel-related C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0056.3

ChIP-seq Centrality
-log(P-value): 7419.56

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0056.3

ChIP-seq Centrality
-log(P-value): 6853.89

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: