Detailed information of matrix profile MA0047.2

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Profile summary
Name: Foxa2
Matrix ID: MA0047.2
Class: Fork head/winged helix factors
Family: FOX
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 19553195
Uniprot ID: P35583  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 189 140 360 436 391 81 3 634 769 806 3 805 ]
C [ 290 482 24 58 3 2 67 175 36 1 582 1 ]
G [ 195 53 6 265 77 725 4 1 3 1 3 1 ]
T [ 129 131 417 50 338 2 736 1 1 1 221 1 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0047.1 MA0047 1 Foxa2 Rattus norvegicus
FOX Fork head/winged helix factors
MA0047.2 MA0047 2 Foxa2 Mus musculus
FOX Fork head/winged helix factors
MA0047.3 MA0047 3 FOXA2 Homo sapiens
FOX Fork head/winged helix factors
MA0047.4 MA0047 4 FOXA2 Homo sapiens
FOX Fork head/winged helix factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0036.1

ChIP-seq Centrality
-log(P-value): 24765.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0036.1

ChIP-seq Centrality
-log(P-value): 24313.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: