Detailed information of matrix profile MA0103.3

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Profile summary
Name: ZEB1
Matrix ID: MA0103.3
Class: Homeo domain factors
Family: HD-ZF factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8065305
Uniprot ID: P37275  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 3856 3153 3408 129 19269 30 122 1 662 4715 3692 ]
C [ 5828 6601 5178 19381 355 649 97 223 158 5179 5228 ]
G [ 6955 6117 9561 178 501 19257 19878 0 19195 5550 7998 ]
T [ 3490 4258 1982 441 4 193 32 19905 114 4685 3211 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0103.1 MA0103 1 ZEB1 Gallus gallus
HD-ZF factors Homeo domain factors
MA0103.2 MA0103 2 ZEB1 Homo sapiens
HD-ZF factors Homeo domain factors
MA0103.3 MA0103 3 ZEB1 Homo sapiens
HD-ZF factors Homeo domain factors
MA0103.4 MA0103 4 ZEB1 Homo sapiens
HD-ZF factors Homeo domain factors
     

-log(P-value) = 1227.33

TFFM details

TFFM ID: TFFM0127.2

ChIP-seq Centrality
-log(P-value): 1499.6

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0127.2

ChIP-seq Centrality
-log(P-value): 1497.19

TFFM detailed summary logos

Description:

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GC Content: