Detailed information of matrix profile MA0316.1

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Profile summary
Name: HAP5
Matrix ID: MA0316.1
Class: Heteromeric CCAAT-binding factors
Family: Heteromeric CCAAT-binding
Collection: CORE
Taxon: Fungi
Species: Saccharomyces cerevisiae
Data Type: COMPILED
Validation: 17130146
Uniprot ID: Q02516  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 2808 262 0 3922 4156 0 793 3713 624 2389 1002 453 433 97 1789 ]
C [ 0 3123 3788 234 0 0 1904 0 677 1273 440 2155 2485 2108 1033 ]
G [ 1730 497 0 0 0 0 1308 700 3199 637 1451 1137 1513 1914 935 ]
T [ 0 361 387 0 0 4156 537 0 98 127 1817 826 113 200 641 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0316.1 MA0316 1 HAP5 Saccharomyces cerevisiae
Heteromeric CCAAT-binding Heteromeric CCAAT-binding factors
MA0316.2 MA0316 2 HAP5 Saccharomyces cerevisiae
Heteromeric CCAAT-binding Heteromeric CCAAT-binding factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: