Detailed information of matrix profile MA0328.2

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Profile summary
Name: MATALPHA2
Matrix ID: MA0328.2
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Fungi
Species: Saccharomyces cerevisiae S288C
Data Type: PBM
Validation: 9858582
Uniprot ID: P0CY08  
Source: 25215497
Comment:

Sequence logo

Frequency matrix

         
A [ 577 247 80 1000 0 938 10 184 ]
C [ 0 41 9 0 973 0 535 0 ]
G [ 28 72 0 0 0 62 0 815 ]
T [ 394 639 910 0 26 0 455 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0328.1 MA0328 1 MATALPHA2 Saccharomyces cerevisiae
TALE-type homeo domain factors Homeo domain factors
MA0328.2 MA0328 2 MATALPHA2 Saccharomyces cerevisiae S288C
TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: