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Detailed information of matrix profile
MA0462.1
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Matrix > MA0462.1
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Examples:
SPI1
,
P17676
,
ChIP-seq
,
Homo sapiens
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Profile summary
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Name:
BATF::JUN
Matrix ID:
MA0462.1
Class:
Basic leucine zipper factors (bZIP)
Family:
B-ATF-related factors::Jun-related
Collection:
CORE
Taxon:
Vertebrates
Species:
Homo sapiens
Data Type:
ChIP-seq
Validation:
8570175
10777209
22992523
Uniprot ID:
P05412
Q16520
Source:
ENCODE
Comment:
Sequence logo
Download SVG
Frequency matrix
JASPAR
TRANSFAC
MEME
RAW PFM
Reverse comp.
A [
258
0
10522
0
0
148
10522
786
3614
2298
1823
]
C [
0
641
0
4910
0
10374
0
0
2219
2889
5136
]
G [
0
8590
0
5026
0
0
0
1478
170
553
481
]
T [
10264
1291
0
586
10522
0
0
8258
4519
4782
3082
]
Binding sites information
HTML file
FASTA file
BED file
External links
Version information
ChIP-seq centrality
First order TFFM
Detailed TFFM
Wordclouds
More details
Matrix ID
Base ID
Version
Name
Species
Family
Class
Sequence logo
MA0462.1
MA0462
1
BATF::JUN
Homo sapiens
B-ATF-related factors::Jun-related
Basic leucine zipper factors (bZIP)
MA0462.2
MA0462
2
BATF::JUN
Homo sapiens
B-ATF-related factors::Jun-related
Basic leucine zipper factors (bZIP)
MA0462.3
MA0462
3
BATF::JUN
Homo sapiens
B-ATF-related factors::Jun-related
Basic leucine zipper factors (bZIP)
JASPAR
TRANSFAC
MEME
RAW PFM
×
There is no centrality information of the model.
TFFM details
TFFM ID:
TFFM0005.1
ChIP-seq Centrality
-log(P-value):
14856.8
TFFM as XML
TFFM Docs and API
TFFM first order summary logos
Download SVG
TFFM details
TFFM ID:
TFFM0005.1
ChIP-seq Centrality
-log(P-value):
15235.7
TFFM as XML
TFFM Docs and API
TFFM detailed summary logos
Download SVG
Description:
Alias:
Symbol:
Consensus:
Included Models:
GC Content: