Detailed information of matrix profile MA0483.1

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Profile summary
Name: Gfi1B
Matrix ID: MA0483.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 19773260
Uniprot ID: O70237  
Source: PAZAR
Comment:

Sequence logo

Frequency matrix

         
A [ 458 215 27 644 0 707 0 1395 0 0 95 ]
C [ 130 76 1676 1 388 0 0 28 2 0 104 ]
G [ 433 1328 1 0 1312 21 1761 338 0 0 438 ]
T [ 740 142 57 1116 61 1033 0 0 1759 1761 1124 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0483.1 MA0483 1 Gfi1B Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0483.2 MA0483 2 Gfi1B Mus musculus
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0044.1

ChIP-seq Centrality
-log(P-value): 791.347

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0044.1

ChIP-seq Centrality
-log(P-value): 690.761

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: