Detailed information of matrix profile MA0505.2

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Profile summary
Name: Nr5A2
Matrix ID: MA0505.2
Class: Nuclear receptors with C4 zinc fingers
Family: FTZF1related(NR5A)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 12853459
Uniprot ID: P45448  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 7916 4020 2032 19888 327 299 364 266 340 26370 13706 5348 5266 ]
C [ 9076 3118 869 1185 29854 29734 694 338 870 645 8958 14671 5963 ]
G [ 7796 2303 27158 6736 124 166 359 285 29010 2402 5292 4191 4340 ]
T [ 5754 21101 483 2733 237 343 29125 29653 322 1125 2586 6332 14973 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0505.1 MA0505 1 Nr5a2 Mus musculus
FTZF1related(NR5A) Nuclear receptors with C4 zinc fingers
MA0505.2 MA0505 2 Nr5A2 Mus musculus
FTZF1related(NR5A) Nuclear receptors with C4 zinc fingers
MA0505.3 MA0505 3 Nr5A2 Mus musculus
FTZF1related(NR5A) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 3745.48

TFFM details

TFFM ID: TFFM0731.1

ChIP-seq Centrality
-log(P-value): 10870.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0731.1

ChIP-seq Centrality
-log(P-value): 10705.4

TFFM detailed summary logos

Description:

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Consensus:

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GC Content: