Detailed information of matrix profile MA0510.1

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Profile summary
Name: RFX5
Matrix ID: MA0510.1
Class: Fork head/winged helix factors
Family: RFX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 8754849
Uniprot ID: P48382  
Source: ENCODE
Comment:

Sequence logo

Frequency matrix

         
A [ 370 367 1002 0 0 0 645 109 0 3036 447 0 709 1615 1392 ]
C [ 1239 2184 0 0 0 314 408 3514 2023 0 61 0 1283 862 561 ]
G [ 1388 361 782 3868 176 497 2815 0 1 832 2171 3687 1870 796 1572 ]
T [ 871 956 2084 0 3692 3057 0 245 1844 0 1189 181 6 595 343 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0510.1 MA0510 1 RFX5 Homo sapiens
RFX-related factors Fork head/winged helix factors
MA0510.2 MA0510 2 RFX5 Homo sapiens
RFX-related factors Fork head/winged helix factors
MA0510.3 MA0510 3 RFX5 Homo sapiens
RFX-related factors Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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