Detailed information of matrix profile MA0510.2

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Profile summary
Name: RFX5
Matrix ID: MA0510.2
Class: Fork head/winged helix factors
Family: RFX-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 8754849
Uniprot ID: P48382  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 286 67 9 46 882 0 8 2872 188 725 69 142 2842 2902 9 490 ]
C [ 905 12 16 99 61 2664 2266 22 47 7 38 1675 10 15 2819 790 ]
G [ 890 2379 21 10 1613 48 11 56 42 2118 2378 81 98 33 0 1075 ]
T [ 462 26 2206 2166 139 143 760 144 2146 1 3 821 47 4 90 277 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0510.1 MA0510 1 RFX5 Homo sapiens
RFX-related factors Fork head/winged helix factors
MA0510.2 MA0510 2 RFX5 Homo sapiens
RFX-related factors Fork head/winged helix factors
MA0510.3 MA0510 3 RFX5 Homo sapiens
RFX-related factors Fork head/winged helix factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0090.1

ChIP-seq Centrality
-log(P-value): 720.993

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0090.1

ChIP-seq Centrality
-log(P-value): 722.168

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: