Detailed information of matrix profile MA0526.4

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Profile summary
Name: USF2
Matrix ID: MA0526.4
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 28473536
Uniprot ID: Q15853  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 4809 7043 450 0 18731 0 41 10 15 16175 33 3988 ]
C [ 2514 583 2548 18731 6 18731 0 4 9 162 11694 7483 ]
G [ 7445 11688 160 6 4 9 18731 12 18731 2556 574 2488 ]
T [ 3963 46 16183 7 5 39 0 18731 0 440 7037 4772 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0526.1 MA0526 1 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0526.2 MA0526 2 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0526.3 MA0526 3 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0526.4 MA0526 4 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
MA0526.5 MA0526 5 USF2 Homo sapiens
bHLH-ZIP Basic helix-loop-helix factors (bHLH)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0738.1

ChIP-seq Centrality
-log(P-value): 54710.2

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0738.1

ChIP-seq Centrality
-log(P-value): 54591.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: