Detailed information of matrix profile MA0597.2

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Profile summary
Name: THAP1
Matrix ID: MA0597.2
Class: C2CH THAP-type zinc finger factors
Family: THAP-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type:
Validation: 15863623 15863623
Uniprot ID: Q9NVV9  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 723 657 11 115 78 62 71 8 341 549 819 785 ]
C [ 1870 2374 172 104 4942 4893 4958 220 933 3186 1667 1884 ]
G [ 1606 1472 95 4861 67 183 127 219 3351 966 1854 1549 ]
T [ 979 675 4900 98 91 40 22 4731 553 477 838 960 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0597.1 MA0597 1 THAP1 Homo sapiens
THAP-related factors C2CH THAP-type zinc finger factors
MA0597.2 MA0597 2 THAP1 Homo sapiens
THAP-related factors C2CH THAP-type zinc finger factors
MA0597.3 MA0597 3 THAP1 Homo sapiens
THAP-related factors C2CH THAP-type zinc finger factors
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM0744.1

ChIP-seq Centrality
-log(P-value): 897.77

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0744.1

ChIP-seq Centrality
-log(P-value): 913.863

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: