Detailed information of matrix profile MA0624.2

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Profile summary
Name: Nfatc1
Matrix ID: MA0624.2
Class: Rel homology region (RHR) factors
Family: NFAT-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 23332764
Uniprot ID: O88942  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1422 2411 2969 128 55 62 6080 6107 5947 3310 2150 2006 ]
C [ 1773 1384 1060 227 13 16 30 13 77 1089 788 1154 ]
G [ 1755 1227 1311 65 6106 6058 27 32 43 1140 805 1378 ]
T [ 1241 1169 851 5771 17 55 54 39 124 652 2448 1653 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0624.1 MA0624 1 NFATC1 Meleagris gallopavo
NFAT-related factors Rel homology region (RHR) factors
MA0624.2 MA0624 2 Nfatc1 Mus musculus
NFAT-related factors Rel homology region (RHR) factors
MA0624.3 MA0624 3 Nfatc1 Mus musculus
NFAT-related factors Rel homology region (RHR) factors
     

-log(P-value) = 1874.65

TFFM details

TFFM ID: TFFM0751.1

ChIP-seq Centrality
-log(P-value): 2796.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0751.1

ChIP-seq Centrality
-log(P-value): 3212.49

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: