Detailed information of matrix profile MA0624.2

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Profile summary
Name: Nfatc1
Matrix ID: MA0624.2
Class: Rel homology region (RHR) factors
Family: NFAT-related factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 23332764
Uniprot ID: O88942  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1653 2448 652 124 39 54 55 17 5771 851 1169 1241 ]
C [ 1378 805 1140 43 32 27 6058 6106 65 1311 1227 1755 ]
G [ 1154 788 1089 77 13 30 16 13 227 1060 1384 1773 ]
T [ 2006 2150 3310 5947 6107 6080 62 55 128 2969 2411 1422 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0624.1 MA0624 1 NFATC1 Meleagris gallopavo
NFAT-related factors Rel homology region (RHR) factors
MA0624.2 MA0624 2 Nfatc1 Mus musculus
NFAT-related factors Rel homology region (RHR) factors
MA0624.3 MA0624 3 Nfatc1 Mus musculus
NFAT-related factors Rel homology region (RHR) factors
     

-log(P-value) = 1874.65

TFFM details

TFFM ID: TFFM0751.1

ChIP-seq Centrality
-log(P-value): 2796.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0751.1

ChIP-seq Centrality
-log(P-value): 3212.49

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: