Detailed information of matrix profile MA0627.1

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Profile summary
Name: Pou2f3
Matrix ID: MA0627.1
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: universal protein binding microarray (PBM)
Validation: 23332764
Uniprot ID: P31362  
Source:
Comment:

Sequence logo

Frequency matrix

         
A [ 16 19 19 40 96 1 8 26 8 6 98 1 75 28 39 44 ]
C [ 18 35 11 29 2 0 1 0 0 94 0 0 4 40 15 20 ]
G [ 24 16 24 16 0 0 0 0 91 0 1 0 12 13 22 20 ]
T [ 41 29 46 15 2 99 91 74 0 0 0 99 9 19 24 16 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0627.1 MA0627 1 Pou2f3 Mus musculus
POU domain factors Homeo domain factors
MA0627.2 MA0627 2 POU2F3 Homo sapiens
POU domain factors Homeo domain factors
MA0627.3 MA0627 3 POU2F3 Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0562.1

ChIP-seq Centrality
-log(P-value): 30846.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0562.1

ChIP-seq Centrality
-log(P-value): 30315.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: