Detailed information of matrix profile MA0666.2

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Profile summary
Name: MSX1
Matrix ID: MA0666.2
Class: Homeo domain factors
Family: NK
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 18585359
Uniprot ID: P28360  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 783 227 5064 5064 0 0 5064 1996 ]
C [ 2126 5064 125 42 0 280 0 925 ]
G [ 1415 0 146 0 0 0 159 1322 ]
T [ 740 2415 0 0 5064 5064 0 820 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0666.1 MA0666 1 MSX1 Homo sapiens
NK Homeo domain factors
MA0666.2 MA0666 2 MSX1 Homo sapiens
NK Homeo domain factors
MA0666.3 MA0666 3 MSX1 Homo sapiens
NK Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: