Detailed information of matrix profile MA0693.3

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Profile summary
Name: Vdr
Matrix ID: MA0693.3
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 8065900
Uniprot ID: P48281  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 9080 11520 6355 35948 805 978 1685 1602 36305 9051 11175 ]
C [ 11090 7552 4678 644 599 520 655 34477 661 8330 7590 ]
G [ 8420 7467 25359 1137 36028 1555 574 406 826 9421 9017 ]
T [ 9952 12003 2150 813 1110 35489 35628 2057 750 11740 10760 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0693.1 MA0693 1 Vdr Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA0693.2 MA0693 2 VDR Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA0693.3 MA0693 3 Vdr Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA0693.4 MA0693 4 Vdr Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 0.0

TFFM details

TFFM ID: TFFM0769.1

ChIP-seq Centrality
-log(P-value): 1713.02

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0769.1

ChIP-seq Centrality
-log(P-value): 1453.52

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: