Detailed information of matrix profile MA0700.2

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Profile summary
Name: LHX2
Matrix ID: MA0700.2
Class: Homeo domain factors
Family: HD-LIM
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 23332764
Uniprot ID: P50458  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 2021 1727 39 6256 6082 133 420 640 978 1868 1710 ]
C [ 1035 1463 6 5 64 77 52 37 1045 1252 1261 ]
G [ 1343 976 13 5 58 101 71 5612 3412 949 988 ]
T [ 1934 2167 6275 67 129 6022 5790 44 898 2264 2374 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0700.1 MA0700 1 LHX2 Homo sapiens
HD-LIM Homeo domain factors
MA0700.2 MA0700 2 LHX2 Homo sapiens
HD-LIM Homeo domain factors
MA0700.3 MA0700 3 LHX2 Homo sapiens
HD-LIM Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0185.2

ChIP-seq Centrality
-log(P-value): 3102.0

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0185.2

ChIP-seq Centrality
-log(P-value): 3069.65

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: