Detailed information of matrix profile MA0711.1

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Profile summary
Name: OTX1
Matrix ID: MA0711.1
Class: Homeo domain factors
Family: Paired-related HD factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 18585360
Uniprot ID: P32242  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 4787 3363 378 23441 0 544 23441 8636 ]
C [ 10599 8662 659 3160 0 254 0 3186 ]
G [ 6182 23441 23441 0 0 0 90 6501 ]
T [ 1873 789 647 243 23441 23441 745 5118 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0711.1 MA0711 1 OTX1 Homo sapiens
Paired-related HD factors Homeo domain factors
MA0711.2 MA0711 2 OTX1 Homo sapiens
Paired-related HD factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: