Detailed information of matrix profile MA0745.1

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Profile summary
Name: SNAI2
Matrix ID: MA0745.1
Class: C2H2 zinc finger factors
Family: More than 3 adjacent zinc fingers
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25100569
Uniprot ID: O43623  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 37949 21327 110706 323 3864 3454 4022 16594 21733 ]
C [ 25335 110706 0 110706 110706 784 2678 53727 35246 ]
G [ 37564 5615 525 0 1458 1908 110706 4756 15746 ]
T [ 9858 16003 57 361 16150 110706 5150 56979 37982 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0745.1 MA0745 1 SNAI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0745.2 MA0745 2 SNAI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
MA0745.3 MA0745 3 SNAI2 Homo sapiens
More than 3 adjacent zinc fingers C2H2 zinc finger factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0203.1

ChIP-seq Centrality
-log(P-value): 41620.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0203.1

ChIP-seq Centrality
-log(P-value): 41374.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: