Detailed information of matrix profile MA0754.2

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Profile summary
Name: CUX1
Matrix ID: MA0754.2
Class: Homeo domain factors
Family: HD-CUT
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 7799919
Uniprot ID: P39880  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 742 5241 6064 3 22 1683 6064 41 6064 6064 ]
C [ 1062 90 1 108 6064 2 17 97 586 3213 ]
G [ 616 823 993 84 48 4381 32 57 459 1325 ]
T [ 6064 453 13 6064 103 53 25 6064 620 2110 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0754.1 MA0754 1 CUX1 Homo sapiens
HD-CUT Homeo domain factors
MA0754.2 MA0754 2 CUX1 Homo sapiens
HD-CUT Homeo domain factors
MA0754.3 MA0754 3 CUX1 Homo sapiens
HD-CUT Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0781.1

ChIP-seq Centrality
-log(P-value): 807.166

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0781.1

ChIP-seq Centrality
-log(P-value): 412.502

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: