Detailed information of matrix profile MA0756.2

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Profile summary
Name: ONECUT2
Matrix ID: MA0756.2
Class: Homeo domain factors
Family: HD-CUT
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 8887657
Uniprot ID: O95948  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 1982 2081 9186 0 0 3225 9186 0 9041 ]
C [ 4220 192 63 0 9186 31 0 45 168 ]
G [ 1995 7105 1581 0 0 5962 0 0 1510 ]
T [ 989 91 171 9186 0 0 0 9186 145 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0756.1 MA0756 1 ONECUT2 Homo sapiens
HD-CUT Homeo domain factors
MA0756.2 MA0756 2 ONECUT2 Homo sapiens
HD-CUT Homeo domain factors
MA0756.3 MA0756 3 ONECUT2 Homo sapiens
HD-CUT Homeo domain factors
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0783.1

ChIP-seq Centrality
-log(P-value): 17698.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0783.1

ChIP-seq Centrality
-log(P-value): 17519.4

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: