Detailed information of matrix profile MA0779.1

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Profile summary
Name: PAX1
Matrix ID: MA0779.1
Class: Paired box factors
Family: Paired domain only
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 19132093
Uniprot ID: P15863  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 1290 0 880 4185 744 0 54 4290 1529 0 3 651 0 475 4396 79 327 ]
C [ 780 1147 4289 32 1230 595 4652 2 43 1017 5304 0 2 1 0 5266 1423 ]
G [ 2136 2561 11 612 1629 2 1769 425 81 4404 2 4489 213 4490 80 0 3157 ]
T [ 2643 1453 849 74 824 3579 1 11 2215 0 3 2 3574 3 234 3 314 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0779.1 MA0779 1 PAX1 Homo sapiens
Paired domain only Paired box factors
MA0779.2 MA0779 2 PAX1 Homo sapiens
Paired domain only Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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