Detailed information of matrix profile MA0784.2

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Profile summary
Name: POU1F1
Matrix ID: MA0784.2
Class: Homeo domain factors
Family: POU domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 2350782
Uniprot ID: P28069  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 2016 1105 131 106 2281 4127 0 91 1564 419 54 4127 3 4127 2323 849 ]
C [ 492 1093 3623 126 1846 7 0 13 0 67 4127 9 3 5 165 702 ]
G [ 743 1260 372 220 192 28 1 2 0 3708 1 5 0 5 57 384 ]
T [ 876 668 504 3907 262 31 4127 4127 2563 16 3 17 4127 59 1804 3278 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0784.1 MA0784 1 POU1F1 Homo sapiens
POU domain factors Homeo domain factors
MA0784.2 MA0784 2 POU1F1 Homo sapiens
POU domain factors Homeo domain factors
MA0784.3 MA0784 3 POU1F1 Homo sapiens
POU domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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