Detailed information of matrix profile MA0833.1

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Profile summary
Name: ATF4
Matrix ID: MA0833.1
Class: Basic leucine zipper factors (bZIP)
Family: ATF-4-related factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 2516827
Uniprot ID: P18848  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 210 169 639 0 19 888 2 1 40 897 888 0 414 ]
C [ 71 117 202 0 0 0 372 0 838 21 3 266 272 ]
G [ 442 409 127 7 1090 0 9 1104 16 0 1 62 101 ]
T [ 170 213 3 981 11 25 470 4 113 3 4 714 78 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0833.1 MA0833 1 ATF4 Homo sapiens
ATF-4-related factors Basic leucine zipper factors (bZIP)
MA0833.2 MA0833 2 ATF4 Homo sapiens
ATF-4-related factors Basic leucine zipper factors (bZIP)
MA0833.3 MA0833 3 ATF4 Homo sapiens
ATF-4-related factors Basic leucine zipper factors (bZIP)
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0163.1

ChIP-seq Centrality
-log(P-value): 973.746

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0163.1

ChIP-seq Centrality
-log(P-value): 936.027

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: