Detailed information of matrix profile MA0856.1

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Profile summary
Name: RXRG
Matrix ID: MA0856.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 15019979
Uniprot ID: P48443  
Source: 23332764
Comment: Data is from Taipale HTSELEX DBD (2013)

Sequence logo

Frequency matrix

         
A [ 27 2999 37558 3913 20 5 574 4 3942 39123 3946 77 20 1886 ]
C [ 2323 935 134 27903 29532 1634 970 76 734 126 22312 23554 20865 21426 ]
G [ 43 49963 17 1 1 0 14 0 56980 35 9 4 63 3800 ]
T [ 36677 78 2 12 9 33003 34468 37922 28 5 102 49 14207 7824 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0856.1 MA0856 1 RXRG Homo sapiens
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

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GC Content: