Detailed information of matrix profile MA0878.3

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Profile summary
Name: CDX1
Matrix ID: MA0878.3
Class: Homeo domain factors
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation: 18585359
Uniprot ID: P47902  
Source: 30250250
Comment:

Sequence logo

Frequency matrix

         
A [ 854 0 29 230 8617 0 355 3749 131 1076 ]
C [ 754 0 97 0 0 344 0 0 8090 7528 ]
G [ 1418 0 72 56 0 0 3795 4868 355 884 ]
T [ 7199 8617 8617 8617 0 8617 4822 11 527 1088 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0878.1 MA0878 1 CDX1 Homo sapiens
HOX Homeo domain factors
MA0878.2 MA0878 2 CDX1 Homo sapiens
HOX Homeo domain factors
MA0878.3 MA0878 3 CDX1 Homo sapiens
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: