Detailed information of matrix profile MA0913.1

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Profile summary
Name: Hoxd9
Matrix ID: MA0913.1
Class: Homeo domain factors
Family: HOX
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: HT-SELEX
Validation: 10523646
Uniprot ID: P28357  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 65 44 7 17 95 194 5 0 194 9 ]
C [ 19 40 0 0 0 7 31 36 12 194 ]
G [ 28 26 7 2 3 7 2 77 275 44 ]
T [ 83 194 194 194 99 13 194 194 24 75 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0913.1 MA0913 1 Hoxd9 Mus musculus
HOX Homeo domain factors
MA0913.2 MA0913 2 HOXD9 Homo sapiens
HOX Homeo domain factors
MA0913.3 MA0913 3 HOXD9 Homo sapiens
HOX Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: