Detailed information of matrix profile MA0930.2

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Profile summary
Name: ABF3
Matrix ID: MA0930.2
Class: Basic leucine zipper factors (bZIP)
Family: Group A
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type:
Validation: 11005831 11005831
Uniprot ID: Q9M7Q3  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1414 5658 143 51 339 420 781 662 3106 2541 ]
C [ 3728 606 8374 51 321 296 368 7781 1283 1700 ]
G [ 1502 908 36 8414 381 7845 1935 60 1779 1589 ]
T [ 1948 1420 39 76 7551 31 5508 89 2424 2762 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA0930.1 MA0930 1 ABF3 Arabidopsis thaliana
Group A Basic leucine zipper factors (bZIP)
MA0930.2 MA0930 2 ABF3 Arabidopsis thaliana
Group A Basic leucine zipper factors (bZIP)
MA0930.3 MA0930 3 ABF3 Arabidopsis thaliana
Group A Basic leucine zipper factors (bZIP)
     

-log(P-value) = 163.844

TFFM details

TFFM ID: TFFM0809.1

ChIP-seq Centrality
-log(P-value): 2584.47

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0809.1

ChIP-seq Centrality
-log(P-value): 2499.67

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: