Detailed information of matrix profile MA1110.2

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Profile summary
Name: Nr1H4
Matrix ID: MA1110.2
Class: Nuclear receptors with C4 zinc fingers
Family: Thyroid hormone receptor-related factors (NR1)
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type:
Validation: 24498423
Uniprot ID: Q60641  
Source: ReMap
Comment:

Sequence logo

Frequency matrix

         
A [ 1210 1154 4597 13 31 1 163 4589 878 984 ]
C [ 1262 1227 83 150 4 0 4351 29 1352 1104 ]
G [ 1239 1700 49 4542 4671 0 10 118 1427 1214 ]
T [ 1025 655 7 31 30 4735 212 0 1079 1434 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1110.1 MA1110 1 NR1H4 Homo sapiens
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA1110.2 MA1110 2 Nr1H4 Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
MA1110.3 MA1110 3 Nr1H4 Mus musculus
Thyroid hormone receptor-related factors (NR1) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 267.903

TFFM details

TFFM ID: TFFM0828.1

ChIP-seq Centrality
-log(P-value): 369.16

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0828.1

ChIP-seq Centrality
-log(P-value): 514.325

TFFM detailed summary logos

Description:

Alias:

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Consensus:

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GC Content: