Detailed information of matrix profile MA1113.1

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Profile summary
Name: PBX2
Matrix ID: MA1113.1
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Validation: 10082572
Uniprot ID: P40425  
Source: 29126285
Comment:

Sequence logo

Frequency matrix

         
A [ 436 378 85 32 32 69 2299 1544 41 241 1604 576 ]
C [ 793 1456 92 25 200 2350 117 507 46 1897 266 708 ]
G [ 754 399 25 2419 21 44 22 309 29 166 176 604 ]
T [ 512 262 2293 19 2242 32 57 135 2379 191 449 607 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1113.1 MA1113 1 PBX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA1113.2 MA1113 2 PBX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
MA1113.3 MA1113 3 PBX2 Homo sapiens
TALE-type homeo domain factors Homeo domain factors
     

-log(P-value) = 1488.41

TFFM details

TFFM ID: TFFM0146.1

ChIP-seq Centrality
-log(P-value): 11379.3

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0146.1

ChIP-seq Centrality
-log(P-value): 6893.72

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: